PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG034270t1
Common NameTCM_034270
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family bZIP
Protein Properties Length: 273aa    MW: 29339.9 Da    PI: 9.8587
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG034270t1genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.4e-10196262363
                       XXCHHHCHHHHHHHHHHHHHHHH......HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   3 elkrerrkqkNReAArrsRqRKk......aeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        ++r +r++kNRe+A rsR+RK+      a++ eLe +v+ L +eN +L+ + e+l    a+l +++
  Thecc1EG034270t1 196 NDRRHKRMMKNRESAARSRARKQvkylftAYTNELELEVAHLLEENAKLRRQQEKLLAAPAQLPKKN 262
                       689*******************987777799*******************99999987777776665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575118No hitNo description
Gene3DG3DSA:1.20.5.1705.1E-10191252No hitNo description
SMARTSM003383.7E-7194264IPR004827Basic-leucine zipper domain
PfamPF001702.6E-9197261IPR004827Basic-leucine zipper domain
CDDcd147071.50E-27198258No hitNo description
SuperFamilySSF579595.31E-8198254No hitNo description
PROSITE patternPS000360201216IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MWASPGKNNN NSSSSIGCGS SPSKSSSTCS SPTPCSSPSP NTLNLSAKKS MEEVWKDISL  60
ASLADHPAGT VLSSTTSNPT FPGMIFQDFL ARPLNKEPPR RGSVSIDTSL TEETTLFGSL  120
PPTPGTLLSL NSGCDFISME SSGDPVRPNP AVNGRTGVGT PSFGSSHNST FHAFGSSAVF  180
PSFCLKRAQE NNENSNDRRH KRMMKNRESA ARSRARKQVK YLFTAYTNEL ELEVAHLLEE  240
NAKLRRQQEK LLAAPAQLPK KNSLSRCLTA PF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007017872.10.0Basic-leucine zipper transcription factor family protein, putative
SwissprotQ84JK29e-49FD_ARATH; Protein FD
TrEMBLA0A061FEF10.0A0A061FEF1_THECC; Basic-leucine zipper transcription factor family protein, putative
STRINGPOPTR_0005s26480.13e-70(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19342772
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.12e-31bZIP family protein
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]